BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029F07SP1|AL429090
(879 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1327 1291 0.0
3x_Contig920 194 2e-49
>3x_Contig1327
Length = 7237
Score = 1291 bits (651), Expect = 0.0
Identities = 665/667 (99%), Gaps = 2/667 (0%)
Strand = Plus / Plus
Query: 1 atcagcaacgttagtaataagcatataaggaaaaacacttatggattccctgcggggaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6571 atcagcaacgttagtaataagcatataaggaaaaacacttatggattccctgcggggaat 6630
Query: 61 ccacaagggaatgatatgggccaaacgatgaatgggtataataatgcaatgcagctaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6631 ccacaagggaatgatatgggccaaacgatgaatgggtataataatgcaatgcagctaagt 6690
Query: 121 agcatggctgcccctatgtcatacgtacctggtgaacaagttaatttgaaccaacttggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6691 agcatggctgcccctatgtcatacgtacctggtgaacaagttaatttgaaccaacttggt 6750
Query: 181 aattcaaaagaccagatagataggtttctaacgaagtctgccaacgaattcatgttagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6751 aattcaaaagaccagatagataggtttctaacgaagtctgccaacgaattcatgttagat 6810
Query: 241 cccagcggcttgaagaaaagaagaaagaacccatcatcgtcaaatgagtctccgatcact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6811 cccagcggcttgaagaaaagaagaaagaacccatcatcgtcaaatgagtctccgatcact 6870
Query: 301 ctatctcataccaagacccatagcactagccaaccaatcaattatagcgcaagtctacca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6871 ctatctcataccaagacccatagcactagccaaccaatcaattatagcgcaagtctacca 6930
Query: 361 aatttgaatctggacgcgttgtcaaaagtgatgttgcctcaacatcaacaactaactcac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6931 aatttgaatctggacgcgttgtcaaaagtgatgttgcctcaacatcaacaactaactcac 6990
Query: 421 aacggcggatcacaacacccactttctgacaagagcatcaagtttgggatatcttcaact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6991 aacggcggatcacaacacccactttctgacaagagcatcaagtttgggatatcttcaact 7050
Query: 481 tcccattcatcgtcgaactcaagcgattctgatgacgaggaagacgatatagatgacgag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7051 tcccattcatcgtcgaactcaagcgattctgatgacgaggaagacgatatagatgacgag 7110
Query: 541 gaagacgaagcagaggacgaggaagatgagaacgacgatagt-gcgacgtaaacgaccac 599
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 7111 gaagacgaagcagaggacgaggaagatgagaacgacgatagtcgcgacgtaaacgaccac 7170
Query: 600 gataacgttgaaggcagggaaa-ctttgacaaagaaatcgatgaaaccaggtaactctat 658
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 7171 gataacgttgaaggcagggaaatctttgacaaagaaatcgatgaaaccaggtaactctat 7230
Query: 659 agagggg 665
|||||||
Sbjct: 7231 agagggg 7237
>3x_Contig920
Length = 3306
Score = 194 bits (98), Expect = 2e-49
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 782 tgcagacacagaaaatcccaaacaagaaagcaacgcatcagctgctgctacatctggtgc 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcagacacagaaaatcccaaacaagaaagcaacgcatcagctgctgctacatctggtgc 60
Query: 842 tgctaccggtgttgctactggcactactactgccaata 879
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgctaccggtgttgctactggcactactactgccaata 98
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6388
Number of Sequences: 1807
Number of extensions: 6388
Number of successful extensions: 63
Number of sequences better than 1.0e-20: 2
length of query: 879
length of database: 10,358,551
effective HSP length: 16
effective length of query: 863
effective length of database: 10,329,639
effective search space: 8914478457
effective search space used: 8914478457
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)